Bioconductor Normalized counts

Showing : normalized counts • reset

vote

replies

1.6k

views

scran scater normalized counts

updated 6.9 years ago by Aaron Lun ★ 29k • written 6.9 years ago by Radek ▴ 90

votes

replies

1.6k

views

deseq2 normalized counts

updated 7.0 years ago by Steve Lianoglou ★ 13k • written 7.0 years ago by anaQ • 0

votes

replies

1.8k

views

normalized counts log2

7.2 years ago agdif ▴ 10

votes

replies

8.6k

views

rnaseq deseq2 normalized counts

updated 7.5 years ago by Michael Love 43k • written 7.5 years ago by JoannaF ▴ 10

votes

replies

6.2k

views

deseq2 normalization normalized counts

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by naets_matthias • 0

vote

replies

2.2k

views

edger batch effect normalized counts

updated 7.8 years ago by Ryan C. Thompson ★ 7.9k • written 7.8 years ago by Yahan • 0

votes

replies

1.7k

views

deseq2 cqn normalization normalized counts

updated 8.1 years ago by Michael Love 43k • written 8.1 years ago by mark.ebbert • 0

votes

1.4k

views

normalized counts grch37 grch38 r bioconductor

8.1 years ago salvocomplicazioni1 • 0

vote

replies

2.1k

views

cn.mops log normalized counts table

updated 8.3 years ago by Günter Klambauer ▴ 540 • written 8.3 years ago by falk.zakrzewski • 0

vote

replies

1.8k

views

deseq2 counts normalized counts

updated 9.3 years ago by Steve Lianoglou ★ 13k • written 9.3 years ago by snamjoshi87 ▴ 40

votes

replies

2.4k

views

shrna edger deseq2 differential expression normalized counts

9.3 years ago Jane Merlevede ▴ 90

vote

replies

3.6k

views

diffbind normalized counts

9.4 years ago GFM ▴ 20

12 results • Page 1 of 1

Recent ...

Replies

Comment: gene Set with high AUC score but no cells assigned to cell type by e.j.aaw.g.erm • 0

It sounds like AUCell is struggling with thresholding because your cDC2 gene set doesn t show a clear bimodal distribution. While a high AU…

Comment: featureCounts -L: high unassigned:mapq fraction by insurancetaaddddaxrealty • 0

FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…

Comment: A problem occurs when running the monocle2 by e.j.aaw.g.erm • 0

For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…

Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k

The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …

Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k

Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…

Votes

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

Awards • All